Warning: file(database/contactList1225/1vfbBC): failed to open stream: No such file or directory in /Volumes/webhd/www/3d-partner/hotspot_detail.php on line 818

Warning: array_shift() expects parameter 1 to be array, boolean given in /Volumes/webhd/www/3d-partner/hotspot_detail.php on line 819

Warning: Invalid argument supplied for foreach() in /Volumes/webhd/www/3d-partner/hotspot_detail.php on line 828

Warning: file(database/seqres_atom_mapping/1vfbBCB.at_se_map): failed to open stream: No such file or directory in /Volumes/webhd/www/3d-partner/_handleAlignment.php on line 215

Warning: Invalid argument supplied for foreach() in /Volumes/webhd/www/3d-partner/_handleAlignment.php on line 216

Warning: file(database/seqres_atom_mapping/1vfbBCC.at_se_map): failed to open stream: No such file or directory in /Volumes/webhd/www/3d-partner/_handleAlignment.php on line 215

Warning: Invalid argument supplied for foreach() in /Volumes/webhd/www/3d-partner/_handleAlignment.php on line 216
Interacting Partners of Query

Template structure (1vfb)

Interface (1vfb)

Interacting information
Query 1vfbBCB
Partner 1vfbBCC
Z-value Interacting score Number of H bonds (query/template) Number of conserve residues (query/template)
-1.00 39.96 5/5 3/3

Alignment of query and template sequences (Structure: red and gray). Identity:%

                                                                      
QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSIS
QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSIS
         10        20        30        40        50        60        70
                                              
KDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS
KDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS
         80        90        100       110    

Alignment of partner and template sequences (Structure: blue and white). Identity:%

                                                                      
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTP
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTP
         10        20        30        40        50        60        70
                                                           
GSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
GSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
         80        90        100       110       120       

Description

Contact residues: Marked by 4 colors
Hydrogen-bond residues:
green
Conserved residues:
orange
Both:
yellow
Others:
gray

Move the mouse cursor to point out contact residues on the sequence. They are colored with pink.

Residue pairs of hydrogen bonding

Query Template(1vfb) Query Template(1vfb) Query Template(1vfb)
Query Partner(1vfbBCC) 1vfb-B1vfb-C Query Partner(1vfbBCC) 1vfb-B1vfb-C Query Partner(1vfbBCC) 1vfb-B1vfb-C
R GR99 G102D ND100 N27D SD100 S24
Y QY101 Q121R GR102 G22

Residue pairs of conservation

Query Template(1vfb) Query Template(1vfb) Query Template(1vfb)
Query Partner(1vfbBCC) 1vfb-B1vfb-C Query Partner(1vfbBCC) 1vfb-B1vfb-C Query Partner(1vfbBCC) 1vfb-B1vfb-C
Y GY32 G117Y DY101 D119Y SY101 S24