Jinn-Moon Yang's students
Current Members
PI
|
楊進木
(Jinn-Moon
Yang)
|
Computer-aided drug design
Systems Biology
Structural Bioinformatics
Databases
Machine Learning
|
Member
of Bioinformatics and Systems Biology Society Taiwan
Reviewer
for over 10 journals
Professor and Director, Institute of Systems
Biology Bioinformatics, National
Chiao-Tung
University
Win
the 2007 National Innovation Award,
iGEMDOCK: A graphical-automatic drug system for docking,
screening and post-analysis.
Win
outstanding Research Award at the National
Chiao-Tung
University, 2006
The total number of citations over 450
and my H-index is 15 based on Google
scholar index
|
Ph. D.
Students
|
Chinese
Name
|
English
Name
|
Major
Fields in BS
|
Memo
(Research Groups, Research Directions,
Publications, Awards)
|
|
陳彥甫
|
Yen-Fu Chen
|
Applied
Chemistry
|
Computer-aided drug design: PathDrug
Journal paper: 3 papers
(win the 2007 National Innovation Award)
|
|
黃章維
|
Jhang-Wei
Huang
|
Biological
Technology
|
Influenza Virus :Antigenic Drift Analysis,
Antigen-Antibody interaction
Journal paper: 2 papers
|
|
許凱程
|
Kai-Cheng Hsu
|
Biological
Technology
|
Computer-aided drug design: PathDrug
|
|
陳世勳
|
Shih-hsun Chen
|
Biochemical Engineering
|
Computer-aided drug design
Journal paper: 1 paper
|
|
羅宇書
|
Yu-Shu Lo
|
Life Science
|
Systems Biology: Protein-protein interaction
Journal paper: 2 papers
|
|
林志達
|
Chih-Ta Lin
|
Life
Science
|
Anticancer drug: Kinase-specific inhibitors
& networks
|
Master
Students
|
Chinese
Name
|
English
Name
|
Major
Fields in BS
|
Memo
(Research Groups, Research Directions)
|
|
林敬立
|
Ching-Li Lin
|
Life Science
|
Computer-aided
drug design
|
|
張力仁
|
Li-Jen Chang
|
Life Science
|
FastBALST & Peptide Drug Design
|
|
林韋帆
|
Wei-Fan Lin
|
Life Science
|
Computer-aided drug design: Anti-cancer drug
|
|
林峻宇
|
Chun-Yu
Lin
|
Biological
Technology
|
Systems Biology: Protein-Protein interaction
Journal paper: 1 paper
|
|
許彥超
|
Yen-Chao Hsu
|
Computer
Science
|
Systems Biology: Protein-Protein Network
|
|
黃御哲
|
|
Life Science
|
Computer-aided
drug design
|
|
林伸融
|
|
Computer
Science
|
Computer-aided
drug design
|
|
林怡瑋
|
|
Life Science
|
Systems
Biology: Protein-DNA/Protein-RNA interaction
|
Alumni
Ph.D. (Total: 4)
|
Chinese
Name
|
English
Name
|
Major Fields in BS
|
Memo
(Research Groups, Research Directions)
|
|
陳俊辰
|
Chun-Chen Chen
|
Biological
Technology
|
June
2009, Ph.D.
Systems Biology: Protein-protein interaction
Journal paper: 3 papers
|
|
董其樺
|
Chi-Hua Tung
|
Biological
Science
|
June
2009, Ph.D.
Structural Bioinformatics: 3D-BLAST,
Antigen-Antibody interaction
Journal paper: 3 papers
|
|
朱彥煒
|
Yen-Wei Chu
|
Computer
Science
|
Current state:
Assistant Professor, Institute of
Bioinformatics, National Chung Hsing University
June
2006, Ph.D.
Title:
Finding Protein Secondary Structure Regularity and Related Applications
(Co-advised
student with Chuen-Tsai
Sun in NCTU
)
|
|
張耀霖
|
Yao-Lin Chang
|
Computer Science
|
June
2008, Ph.D.
Title: A 3D-regulog approach to predict protein-DNA binding partners and
binding model
(Co-advised student with Cheng-Yan Kao in NTU)
|
Master (Total: 19 )
|
Chinese
Name
|
English
Name
|
Major Fields in BS
|
Memo
(Research Groups, Research Directions)
|
|
陳彥修
|
Yen-Hsiu Chen
|
Life Science
|
June 2009, Master
Systems
Biology: Protein-DNA/Protein-RNA interaction
|
|
劉康平
|
Kang-Ping Liu
|
Computer
Science
|
June 2009, Master
Systems Biology: Protein-protein interactions
|
|
陳祐德
|
Yu-Te Chen
|
Aquaculture
|
June
2008, Master
Title: A New Profile Method
to Predict Protein-ligand Binding Site
|
|
羅宇書
|
Yu-Shu Lo
|
Life
Science
|
June
2008, Master
Title: Template-Based Scoring
Function for Predicting Protein-protein Interaction
Current status:
Ph.D. Student in BioXGEM
Journal paper: 2 paper
|
|
許凱程
|
Kai-Cheng
Hsu
|
Biological Technology
|
June
2007, Master
Title:
Binding Affinity Analysis of Protein-ligand
Complexes
Current status: Ph.D. Student in BioXGEM
|
|
陳右儒
|
Yo-Ru Chen
|
Computer Science
|
June 2007, Master
Title: iGEMDOCK: A graphical-automatic
drug design system for docking, screening and
post-analysis
(win the 2007 National
Innovation Award)
Current status: Engineer in
Avocent® Corporation
|
|
楊登凱
|
Teng-Kai Yang
|
Computer Science & Engineering
|
June
2006, Master
Title:
Structural Binding Pocket Clustering and Protein-ligand Interaction Analysis
for ATP-binding Proteins
|
|
陳永強
|
Yung-Chiang
Chen
|
Life Science
|
June
2006, Master
Title: Inferring
Domain Annotated Protein-Protein Interactions through 3D-Domain Interologs
Journal
paper: 2 papers
|
|
葛振寧
|
Chen-Neng Ko
|
Biological Science
|
June
2006, Master
Title:
Structure-based Compound Screening for Helicobacter pylori shikimate kinase (HpSK)
Current
status: Research Assistant in BioXGEM
Journal
paper: 1 paper
|
|
黃章維
|
Jhang-Wei Huang
|
Biological Technology
|
June
2006, Master
Title: Predicting
Antigenic Variants of Influenza A H3N2 Viruses by Building Relationships
between Genetic Evolution and Antigenic Drift
Current status: Ph.D. Student in BioXGEM
Journal
paper: 2 papers
|
|
董其樺
|
Chi-Hua Tung
|
Biological Science
|
June 2005, Master
Title: PiSA-BLAST: A New Tool for Protein Structure
Alignment and Database Search
Website: 3D-BLAST
(Win the prize of 2005 Best M.S. and Ph. D.
Dissertation Award hosted
by IICM (Institute of Information & Computing Machinery) )
Current status: Ph.D. Student in BioXGEM
Journal
paper: 3 papers
|
|
邱一原
|
I-Yuan
Chiu
|
Computer Science
|
June 2005, Master
Title: Optimizing New Energy Functions for Protein
Folding
Journal
paper: 1 paper
|
|
林柏村
|
Po-Tsun Lin
|
Life Science
|
June 2005, Master
Title: LigSeeSVM: Support Vector Machines and Data
fusion for Ligand-based Compound Screening and Applications to GPCR and GABAA
|
|
陳宏助
|
Heng-Chu Chen
|
Life Science
|
June 2005, Master
Title: Inferring Protein-protein Interactions from
Structural Domain-domain Interactions
Website: DAPID
|
|
張立人
|
Li-Jen
Chang
|
Medical Technology
|
June 2005, Master
Title: Integrating GEMDOCK with GEM-PLS and GEM-kNN for
QSAR modeling of huAChE and AGHO
|
|
沈再威
|
Tsai-Wei Shen
|
Biological Science
|
June 2004
Title: Enhancing
GEMDOCK on Virtual Database Screening and Application to Envelope Protein and
D-Hydantoinase (Win the prize of 2004 Best M.S. and Ph. D. Dissertation Award hosted by IICM (Institute
of Information & Computing Machinery) )
Journal paper:
2 papers
|
|
林建宏
|
Chien-Heng Lin
|
Biological Science
|
June 2004
Title: MuLiSA: Analysis and Identification of
Functional Motifs and Residues in Proteins by Multiple Ligand-bound Structure
Alignments
|
|
陳彥甫
|
Yen-Fu Chen
|
Life Science
|
June 2004
Title: Validation and Application of GEMDOCK
and Application of Data Fusion in Virtual Screening
Current status: Ph.D. Student in BioXGEM
Journal
paper: 2 papers
|
|
張育祥
|
Yu-Hsiang
Chang
|
Life
Science
|
June 2003
Title: A New Energy Model for Protein-Protein
Interaction Prediction
|
|
